Once I recovered my Hard Drive, my other hard drive, T: was the active partition. C: seemed to be my secondary. I don't know why, but it was...
Then I tried to switch them with Partition Magic. C to T, and T to C. What it didn't do, was change the references from T, to C. So all my shortcuts and uninstall information still pointed to T, which doesn't exist anymore because I removed it physically.
So I fixed the references, and it was partially fixed. I just needed to change the shortcuts, because it didn't change references on shortcuts. So I have something very tedious to do.
So then, I install my new computer parts that got shipped in, and I boot up and get the blue screen of death upon loading. Reset, Blue screen of death.
Then I repaired Windows installation, and I guess I am OK now. Just a lot of downloading to do. I preserved my important data though, it was only a repair installation.