XP Pro Issues - Chkdsk and Disk Management

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Hi,

Had a bout with a virus and ran Malwarebytes. All is clean now, but Chkdsk will not run after a restart when selected and only the cd/dvdrom drive is listed in Disk Management (and not the four hard drive partitions). USB flash drives will appear in the Device Manager, but nowhere else and cannot be accessed.

Thank you in advance for the help.
 
Alternate Data Streams Containing Files

Ok. As I'd prefer to not connect the problem computer to the internet, can I download all of the recommended programs and burn them to a cd using another computer, loosing any Alternate Data Streams information that may be required to run the files?

Or is it just a standard warning that accompanies writing any executible file to cd?
 
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