Inactive Malwarebytes found files multiple times after scans.

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I have under circumstances accidentally plugged in a potentially infected usb drive to my computer. To see if any damage was done I downloaded and ran malwarebytes chameleon and it returned 28 files found. I quarantined these but before I could click save log file the Mbam chameleon restarted my system to finish malware removal, I let my system reboot and ran Mbam chameleon a second time. 5 files found. I quarantined these and saved the log file just barely before the restart. During both of those mbam scans I had time to write down the names of some of the files on a piece of paper.
FIRST SCAN:
Pup Optional Delta Registry Key
Pup Optional uTorrent Rontrol Registry Rey
Pup Optional Babylon Registry Key
Pup Optional Frostwire Regisstry Key
Pup Optional Conduit File
Pup Optional BrowserProtector File
Pup Optional Filescout
Pup Optional Pricegong
SECOND SCAN:
Pup Optional Babylon Toolbar A Registry Key
Pup Optional DatamanagerA Registry Key
Pup Optional Pricegong A Registry Key
Pup Optional Babylon A Registry Key
Pup Optional Conduit A Registry Key
Pup Optional Startpage Registry Data
After the second reboot I ran Malwarebytes without the chameleon once and it returned clean after which I ran it again with the chameleon and that also returned clean.
It should be noted that I have Avira installed and have ran multiple fullsystem,rootkit and normal hdd scans and when mbam found files Avira did not. I also have Dropbox installed.and it is actively backing up files to various projects.

Attached is the log file I managed to get from the second chameleon scan.
The file is twice zipped because im writing this on a laptop separate from my infected system and I started off by zipping the file and then sending it through filemail which zipps it again, and for some reason it wont let me attach the zip inside the zip so ive attached the double zip,

Since it took 2 scans to find and remove the files im scared I might have been subjected to some root ot bootkit, any help on how to proceed to make sure my system is clean and safe would be greatly apreciated.
 

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Welcome aboard

Please, complete all steps listed here: https://www.techspot.com/community/...lware-removal-preliminary-instructions.58138/
Make sure, you PASTE all logs. If some log exceeds 50,000 characters post limit, split it between couple of replies.
Attached logs won't be reviewed.

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