After Combofix ran the reboot, I got a message asking if i wanted to boot normally or in recovery mode. I selected normal and the machine booted normally. I followed the instructions from a previous post where the system runs a checkdisk on the next boot.
When I did the next boot, the system offered me the same 2 options. Boot Normal or Boot with recovery.I chose Boot with recovery and then the system attempts to run a fix. If a fix cannot be applied, the system normally offers a restore point option. In my case , the fix could be applied and all I was offered was a option to mail the problem to MS or to attempt another reboot.