Changing motherboards with built in RAID array...

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My PC has been having problems (not booting up, even to BIOS) and after a bit of detective work have narrowed down the problem to either the motherboard of CPU (the only bits I can't swap at home). I am using the onboard Via raid controller on an Asus K8V Deluxe, and was wondering if i replaced the motherboard would i still be able to plug in my hdd's and have them working as normal, as long as i setup the new motherboards setting exactly the same or is my data lost?
 
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